Research in Computational Molecular Biology
Springer Berlin (Verlag)
978-3-642-02007-0 (ISBN)
Searching Protein 3-D Structures in Linear Time.- Optimization-Based Peptide Mass Fingerprinting for Protein Mixture Identification.- Boosting Protein Threading Accuracy.- New Perspectives on Gene Family Evolution: Losses in Reconciliation and a Link with Supertrees.- A Probabilistic Graphical Model for Ab Initio Folding.- Topology-Free Querying of Protein Interaction Networks.- Cross Species Expression Analysis of Innate Immune Response.- Haplotype Inference in Complex Pedigrees.- Storage and Retrieval of Individual Genomes.- An Online Approach for Mining Collective Behaviors from Molecular Dynamics Simulations.- Parameter Synthesis in Nonlinear Dynamical Systems: Application to Systems Biology.- Spatial Clustering of Multivariate Genomic and Epigenomic Information.- How Many Bootstrap Replicates Are Necessary?.- A Robust Bayesian Two-Sample Test for Detecting Intervals of Differential Gene Expression in Microarray Time Series.- Incorporating Nucleosomes into Thermodynamic Models of Transcription Regulation.- Combinatorial Algorithms for Structural Variation Detection in High Throughput Sequenced Genomes.- Optimizing PCR Assays for DNA Based Cancer Diagnostics.- The Multi-State Perfect Phylogeny Problem with Missing and Removable Data: Solutions via Integer-Programming and Chordal Graph Theory.- COE: A General Approach for Efficient Genome-Wide Two-Locus Epistasis Test in Disease Association Study.- Overlapping Pools for High Throughput Targeted Resequencing.- Deep Sequencing of a Genetically Heterogeneous Sample: Local Haplotype Reconstruction and Read Error Correction.- Lifting Prediction to Alignment of RNA Pseudoknots.- Detection of Locally Over-Represented GO Terms in Protein-Protein Interaction Networks.- Protein Fragment Swapping: A Method for Asymmetric, Selective Site-Directed Recombination.- Simultaneous Alignment and Folding of Protein Sequences.- Shared Peptides in Mass Spectrometry Based Protein Quantification.- Evaluating Between-Pathway Models with Expression Data.- Sorting Signed Permutations by Inversions in O(nlogn) Time.- Finding Biologically Accurate Clusterings in Hierarchical Tree Decompositions Using the Variation of Information.- Identification and Frequency Estimation of Inversion Polymorphisms from Haplotype Data.- On the Relationship between DNA Periodicity and Local Chromatin Structure.- Phylogenies without Branch Bounds: Contracting the Short, Pruning the Deep.- Detecting the Presence and Absence of Causal Relationships between Expression of Yeast Genes with Very Few Samples.- An Adaptive and Memory Efficient Algorithm for Genotype Imputation.- A Statistical Framework for the Functional Analysis of Metagenomes.- Learning Models for Aligning Protein Sequences with Predicted Secondary Structure.
Erscheint lt. Verlag | 4.5.2009 |
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Reihe/Serie | Lecture Notes in Bioinformatics | Lecture Notes in Computer Science |
Zusatzinfo | XVI, 534 p. |
Verlagsort | Berlin |
Sprache | englisch |
Maße | 155 x 235 mm |
Gewicht | 836 g |
Themenwelt | Mathematik / Informatik ► Informatik |
Naturwissenschaften ► Biologie | |
Schlagworte | Algorithm analysis and problem complexity • algorithms • Bioinformatics • Biology • Cognition • Evolution • gene family evolution • Genome • haplotype • Hardcover, Softcover / Informatik, EDV/Anwendungs-Software • immune response • molecular dynamics • Nucleosomes • protein fingerprinting • Protein Folding • protein interaction • protein structures • spatial clustering • systems biology |
ISBN-10 | 3-642-02007-0 / 3642020070 |
ISBN-13 | 978-3-642-02007-0 / 9783642020070 |
Zustand | Neuware |
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