Plant Bioinformatics
Humana Press Inc. (Verlag)
978-1-4939-3166-8 (ISBN)
Authoritative and thorough, Plant Bioinformatics: Methods and Protocols helps researchers with the increasing volume and diversity of data from different plants and also the integration of multiple diverse forms of data.
Using GenBank.- UniProtKB/Swiss-Prot, The Manually Annotated Section of the UniProt KnowledgeBase: How to Use the Entry View.- KEGG Bioinformatics Resource for Plant Genomics and Metabolomics.- Plant Pathway Databases.- The Plant Ontology: A Tool for Plant Genomics.- Ensembl Plants: Integrating Tools for Visualizing, Mining, and Analyzing Plant Genomics Data.- Gramene: A Resource for Comparative Analysis of Plants Genomes and Pathways.- PGSB/MIPS Plant Genome Information Resources and Concepts for the Analysis of Complex Grass Genomes.- MaizeGDB: The Maize Genetics and Genomics Database.- WheatGenome.info: A Resource for Wheat Genomics Resource.- User Guidelines for the Brassica Database: BRAD.- TAG Sequence Identification of Genomic Regions Using TAGdb.- Short Read Alignment Using SOAP2.- Tablet: Visualizing Next-Generation Sequence Assemblies and Mappings.- Analysis of Genotyping-by-Sequencing (GBS) Data.- Skim-Based Genotyping by Sequencing Using a Double Haploid Population to Call SNPs, Infer Gene Conversions and Improve Genome Assemblies.- Finding and Characterizing Repeats in Plant Genomes.- Analysis of RNA-Seq Data Using TopHat and Cufflinks.
Reihe/Serie | Methods in Molecular Biology ; 1374 |
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Zusatzinfo | 116 Illustrations, color; 12 Illustrations, black and white; XI, 365 p. 128 illus., 116 illus. in color. |
Verlagsort | Totowa, NJ |
Sprache | englisch |
Maße | 178 x 254 mm |
Themenwelt | Naturwissenschaften ► Biologie ► Botanik |
Schlagworte | Bioinformatics • crop breeding • Genome • heritable agronomic traits • 'Omics technologies • phenome |
ISBN-10 | 1-4939-3166-0 / 1493931660 |
ISBN-13 | 978-1-4939-3166-8 / 9781493931668 |
Zustand | Neuware |
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